- #DOWNLOAD IMAGEJ SOFTWARE MAC OS#
- #DOWNLOAD IMAGEJ SOFTWARE ARCHIVE#
- #DOWNLOAD IMAGEJ SOFTWARE SOFTWARE#
- #DOWNLOAD IMAGEJ SOFTWARE SERIES#
In addition, we expect you to include adequate citations and acknowledgments whenever you present or publish results that are based on it.
#DOWNLOAD IMAGEJ SOFTWARE SOFTWARE#
#DOWNLOAD IMAGEJ SOFTWARE ARCHIVE#
Unzip the archive file containing the Java class files and a example of macro.Put it into the plugins folder of ImageJ or Fiji.It doesn't take more than a couple of minutes to install.
#DOWNLOAD IMAGEJ SOFTWARE MAC OS#
ImageJ has a public domain licence it runs on several plateforms: Unix, Linux, Windows, and Mac OS X. It runs also on the image-processing package Fiji. The software provided here is a plugin for ImageJ, a general purpose image-processing and image-analysis package. It is very slow and requires a huge amount of memory. Nevertheless, the 3D version of the watershed is not provided in this plugin. The watershed alogrithm can be also implemented for isotropic 3D dataset.Īn example of application for granulometry is shown in the paper of Tsukahara and al. It also includes a fancy colorized animation which helps to understand the flooding process. It has various kind of outputs to display the "dams" of the watershed or the "catchment basins" of the watershed. This plugin applies the watershed flooding algorithm which can be interrupted to a user-specified level.Įach particle should have a local maximum (or local minimum when the objects are dark) to define a catchment basin. This plugin includes a Gaussian blur filter.
Median filter or Gaussian blurring are the simple way to do it, more sophisticated filters likeīilateral Filter or edge-perserving filters can give better results. To prevent oversegmentation due to the noise, it is better to denoise first the image with appropriate denoising programs: It accepts stack of images, but the processing is alwasy done slice-by-slice (2D). This plugin works with graylevel images containing bright particles on dark background or dark particles on bright background. Tsukahara et al., Coupled Tomography and Distinct-Element-Method Approach to Exploring the Granular Media Microstructure in a Jamming Hourglass, Unser, Teaching Image-Processing Programming in Java, The grayscale watershed segmentation is useful to segment particles in contact when the model of shape is unknown a priori. This implementation is in contrast with the classical approach working on the distance map image obtaining after thresholding. This Java plugin is able to segment an image using the watershed algorithm by directly flooding graylevel images. Written by Daniel Sage at the Biomedical Image Group, EPFL, Switzerland Density or gray scale calibration is also available.Graylevel Watershed An ImageJ plugin to apply watershed segmentation on graylevel images Spatial calibration is available to provide real world dimensional measurements in units such as millimeters. The program supports any number of windows (images) simultaneously, limited only by available memory. All analysis and processing functions are available at any magnification factor. Image can be zoomed up to 32:1 and down to 1:32. It does geometric transformations such as scaling, rotation and flips. It supports standard image processing functions such as contrast manipulation, sharpening, smoothing, edge detection and median filtering.
It can create density histograms and line profile plots. It can calculate area and pixel value statistics of user-defined selections. It is multithreaded, so time-consuming operations such as image file reading can be performed in parallel with other operations.
#DOWNLOAD IMAGEJ SOFTWARE SERIES#
It supports "stacks", a series of images that share a single window. It can read many image formats including TIFF, GIF, JPEG, BMP, DICOM, FITS and "raw". It can display, edit, analyze, process, save and print 8-bit, 16-bit and 32-bit images.
It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.1 or later virtual machine. ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh.